Transcript: lnc-FNIP1-6:1

Basic information

LNCipedia transcript ID: lnc-FNIP1-6:1 
LNCipedia gene ID: lnc-FNIP1-6
Location (hg19): chr5:130799743-130808613
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 581 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT103698
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -242.2831 non-coding 
CPAT coding probability 32.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FNIP1-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HINT1-2:1
4.0 lnc-HINT1-2:1
4.1 lnc-HINT1-2:1
5.0 lnc-HINT1-2:1
5.1 lnc-TIFAB-88:1
5.2 lnc-FNIP1-6:1