Transcript: lnc-FOXD4L5-25:11

Basic information

LNCipedia transcript ID: lnc-FOXD4L5-25:11 
LNCipedia gene ID: lnc-FOXD4L5-25
Location (hg19): chr9:66523963-66533431
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 397 bp
Exons: 4
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000415872; ENST00000415872.1; RP11-262H14.3-002; OTTHUMT00000037075.1; NONHSAT131545
Alternative gene names: ENSG00000234665; RP11-262H14.3; ENSG00000234665.1; OTTHUMG00000013293.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 4.5802 non-coding 
CPAT coding probability 0.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FOXD4L5-25:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FAM75A7-4:2
3.1 lnc-FAM75A7-4:2
4.0 lnc-FAM75A7-4:2
4.1 lnc-FAM75A7-4:2
5.0 lnc-FAM75A7-4:2
5.1 lnc-ZFAND5-79:11
5.2 lnc-FOXD4L5-25:11