Transcript: lnc-FOXD4L5-25:8

Basic information

LNCipedia transcript ID: lnc-FOXD4L5-25:8 
LNCipedia gene ID: lnc-FOXD4L5-25
Ensembl Gene ID: ENSG00000234665
Ensembl Transcript ID: ENST00000585533
Location (hg19): chr9:66523963-66553601
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 459 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT131546; ENST00000585533.1
Alternative gene names: ENSG00000234665.4; RP11-262H14.3; ENSG00000234665.8; AL512625.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 15.2328 non-coding 
CPAT coding probability 9.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FOXD4L5-25:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM75A7-4:8
4.0 lnc-FAM75A7-4:8
4.1 lnc-FAM75A7-4:8
5.0 lnc-FAM75A7-4:8
5.1 lnc-ZFAND5-79:8
5.2 lnc-FOXD4L5-25:8