Transcript: lnc-FOXG1-20:1

Basic information

LNCipedia transcript ID: lnc-FOXG1-20:1 
LNCipedia gene ID: lnc-FOXG1-20
Location (hg19): chr14:28576463-28601974
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 467 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: l_958_chr14:28576462-28601882_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -292.7104 non-coding 
CPAT coding probability 0.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FOXG1-20:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FOXG1-11:1
4.0 lnc-FOXG1-11:1
4.1 lnc-FOXG1-11:1
5.0 lnc-FOXG1-11:1
5.1 lnc-G2E3-24:1
5.2 lnc-FOXG1-20:1