Transcript: lnc-FOXG1-4:6

Basic information

LNCipedia transcript ID: lnc-FOXG1-4:6 
LNCipedia gene ID: lnc-FOXG1-4
Location (hg19): chr14:29620347-29636919
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 722 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00022456; NONHSAT036191
Alternative gene names: XLOC_010784; linc-G2E3-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -164.3687 non-coding 
CPAT coding probability 0.88% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FOXG1-4:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C14orf23-4:1
3.1 lnc-C14orf23-4:1
4.0 lnc-C14orf23-4:1
4.1 lnc-C14orf23-4:1
5.0 lnc-C14orf23-4:1
5.1 lnc-G2E3-15:2
5.2 lnc-FOXG1-4:6