Transcript: lnc-FOXL2NB-7:4

Basic information

LNCipedia transcript ID: lnc-FOXL2NB-7:4 
LNCipedia gene ID: lnc-FOXL2NB-7
Location (hg19): chr3:138976060-138982407
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1099 bp
Exons: 4
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc003ern_2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -44.2048 non-coding 
CPAT coding probability 8.53% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FOXL2NB-7:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C3orf72-7:2
4.0 lnc-C3orf72-7:2
4.1 lnc-C3orf72-7:2
5.0 lnc-C3orf72-7:2
5.1 lnc-FOXL2NB-7:2
5.2 lnc-FOXL2NB-7:4