Transcript: lnc-FOXM1-3:1

Basic information

LNCipedia transcript ID: lnc-FOXM1-3:1 
LNCipedia gene ID: lnc-FOXM1-3
Location (hg19): chr12:3315450-3316241
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 699 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc001qls_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -92.4948 non-coding 
CPAT coding probability 5.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FOXM1-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FOXM1-3:1
4.0 lnc-FOXM1-3:1
4.1 lnc-FOXM1-3:1
5.0 lnc-FOXM1-3:1
5.1 lnc-CHD4-93:1
5.2 lnc-FOXM1-3:1