Transcript: lnc-FOXO6-2:16

Basic information

LNCipedia transcript ID: lnc-FOXO6-2:16 
LNCipedia gene ID: lnc-FOXO6-2
Location (hg19): chr1:41708034-41750596
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 985 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000235358.1|MICT00000009000.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -9.0045 non-coding 
CPAT coding probability 0.91% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FOXO6-2:16 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-FOXO6-2:16
5.0 lnc-FOXO6-2:16
5.1 lnc-KCNQ4-12:14
5.2 lnc-FOXO6-2:16