Transcript: lnc-FOXO6-2:17

Basic information

LNCipedia transcript ID: lnc-FOXO6-2:17 
LNCipedia gene ID: lnc-FOXO6-2
Location (hg19): chr1:41708034-41730230
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 634 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000235358.1|ENST00000425554.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -9.0045 non-coding 
CPAT coding probability 0.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FOXO6-2:17 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-FOXO6-2:17
5.0 lnc-FOXO6-2:17
5.1 lnc-KCNQ4-12:12
5.2 lnc-FOXO6-2:17