Transcript: lnc-FOXQ1-14:1

Basic information

LNCipedia transcript ID: lnc-FOXQ1-14:1 
LNCipedia gene ID: lnc-FOXQ1-14
Location (hg19): chr6:1198050-1201663
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3614 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT106400
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -97.4243 non-coding 
CPAT coding probability 17.53% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FOXQ1-14:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AL033381.1-9:1
4.0 lnc-AL033381.1-9:1
4.1 lnc-AL033381.1-9:1
5.0 lnc-AL033381.1-9:1
5.1 lnc-RIPK1-117:1
5.2 lnc-FOXQ1-14:1