Transcript: lnc-FRG1-12:2

Basic information

LNCipedia transcript ID: lnc-FRG1-12:2 
LNCipedia gene ID: lnc-FRG1-12
Location (hg19): chr4:190197916-190198838
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 252 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00008385; NONHSAT099772
Alternative gene names: XLOC_003839; linc-FRG1-5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -5.1616 non-coding 
CPAT coding probability 0.18% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FRG1-12:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FRG1-5:1
3.1 lnc-FRG1-5:1
4.0 lnc-FRG1-5:1
4.1 lnc-FRG1-5:1
5.0 lnc-FRG1-5:1
5.1 lnc-TRIML1-5:5
5.2 lnc-FRG1-12:2