Transcript: lnc-FRG1-12:3

Basic information

LNCipedia transcript ID: lnc-FRG1-12:3 
LNCipedia gene ID: lnc-FRG1-12
Location (hg19): chr4:190197917-190198269
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 205 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00008386; NONHSAT099773
Alternative gene names: XLOC_003839; linc-FRG1-5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -1.1582 non-coding 
CPAT coding probability 0.18% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FRG1-12:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FRG1-5:2
3.1 lnc-FRG1-5:2
4.0 lnc-FRG1-5:2
4.1 lnc-FRG1-5:2
5.0 lnc-FRG1-5:2
5.1 lnc-TRIML1-5:6
5.2 lnc-FRG1-12:3