Transcript: lnc-FRMD8-4:2

Basic information

LNCipedia transcript ID: lnc-FRMD8-4:2 
LNCipedia gene ID: lnc-FRMD8-4
Location (hg19): chr11:65222784-65234191
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 800 bp
Exons: 3
Sources: Ensembl release 83 - Dec 2015
Alternative transcript names: ENST00000309775.8
Alternative gene names: ENSG00000173727.11; CMB9-22P13.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -5.2857 non-coding 
CPAT coding probability 1.00% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FRMD8-4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-AP000769.1-3:2
4.1 lnc-AP000769.1-3:2
5.0 lnc-AP000769.1-3:2
5.1 lnc-PPP2R5B-37:2
5.2 lnc-FRMD8-4:2