Transcript: lnc-FSD1L-1:1

Basic information

LNCipedia transcript ID: lnc-FSD1L-1:1 
LNCipedia gene ID: lnc-FSD1L-1
Location (hg19): chr9:108148969-108158299
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 576 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000436716.1; RP11-287A8.6-001; OTTHUMT00000053502.1; NONHSAT133815
Alternative gene names: ENSG00000242010.1; RP11-287A8.6; OTTHUMG00000020422.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -86.3503 non-coding 
CPAT coding probability 0.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FSD1L-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FSD1L-1:1
4.0 lnc-FSD1L-1:1
4.1 lnc-FSD1L-1:1
5.0 lnc-FSD1L-1:1
5.1 lnc-PRPF4-127:1
5.2 lnc-FSD1L-1:1