Transcript: lnc-FSIP1-10:1

Basic information

LNCipedia transcript ID: lnc-FSIP1-10:1 
LNCipedia gene ID: lnc-FSIP1-10
Ensembl Gene ID: ENSG00000278621
Ensembl Transcript ID: ENST00000616754
Location (hg19): chr15:39880558-39881083
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 526 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000616754.1
Alternative gene names: ENSG00000278621.1; CTD-2033D15.3; AC037198.3; AC037198.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 92.6644 coding 
CPAT coding probability 4.79% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-FSIP1-10:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-FSIP1-10:1
4.1 lnc-FSIP1-10:1
5.0 lnc-FSIP1-10:1
5.1 lnc-VPS39-56:1
5.2 lnc-FSIP1-10:1