Transcript: lnc-FSIP1-4:41

Basic information

LNCipedia transcript ID: lnc-FSIP1-4:41 
LNCipedia gene ID: lnc-FSIP1-4
Location (hg19): chr15:39198248-39410924
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 514 bp
Exons: 6
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000259345.1|FTMT25700017113.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -646.3568 non-coding 
CPAT coding probability 10.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FSIP1-4:41 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-FSIP1-4:41
5.0 lnc-FSIP1-4:41
5.1 lnc-VPS39-60:38
5.2 lnc-FSIP1-4:41