Transcript: lnc-FZD10-3:3

Basic information

LNCipedia transcript ID: lnc-FZD10-3:3 
LNCipedia gene ID: lnc-FZD10-3
Location (hg19): chr12:130442132-130444607
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 978 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00020653; NONHSAT031942
Alternative gene names: XLOC_009952; linc-FZD10-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -129.47 non-coding 
CPAT coding probability 27.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FZD10-3:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FZD10-3:3
3.1 lnc-FZD10-3:3
4.0 lnc-FZD10-3:3
4.1 lnc-FZD10-3:3
5.0 lnc-FZD10-3:3
5.1 lnc-RAN-15:3
5.2 lnc-FZD10-3:3