Transcript: lnc-G3BP1-6:1

Basic information

LNCipedia transcript ID: lnc-G3BP1-6:1 
LNCipedia gene ID: lnc-G3BP1-6
Location (hg19): chr5:151309325-151630202
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3591 bp
Exons: 7
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc003luu_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -18.4166 non-coding 
CPAT coding probability 0.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-G3BP1-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-G3BP1-6:1
4.0 lnc-G3BP1-6:1
4.1 lnc-G3BP1-6:1
5.0 lnc-G3BP1-6:1
5.1 lnc-HMGXB3-35:1
5.2 lnc-G3BP1-6:1