Transcript: lnc-GABARAPL2-8:1

Basic information

LNCipedia transcript ID: lnc-GABARAPL2-8:1 
LNCipedia gene ID: lnc-GABARAPL2-8
Ensembl Gene ID: ENSG00000276408
Ensembl Transcript ID: ENST00000621911
Location (hg19): chr16:75590290-75590957
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 668 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000621911.1
Alternative gene names: ENSG00000276408.1; RP11-490B18.5; AC025287.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 18.9221 non-coding 
CPAT coding probability 4.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GABARAPL2-8:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-GABARAPL2-8:1
4.1 lnc-GABARAPL2-8:1
5.0 lnc-GABARAPL2-8:1
5.1 lnc-MARVELD3-71:1
5.2 lnc-GABARAPL2-8:1