Transcript: lnc-GABPA-17:1

Basic information

LNCipedia transcript ID: lnc-GABPA-17:1 
LNCipedia gene ID: lnc-GABPA-17
Location (hg19): chr21:28016569-28045429
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 833 bp
Exons: 5
Sources: Nielsen et al.,2014
Alternative transcript names: l_2184_NR_024357
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 5.0315 non-coding 
CPAT coding probability 0.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GABPA-17:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GABPA-17:1
4.0 lnc-GABPA-17:1
4.1 lnc-GABPA-17:1
5.0 lnc-GABPA-17:1
5.1 lnc-OLIG1-59:1
5.2 lnc-GABPA-17:1