Transcript: lnc-GABPA-20:1

Basic information

LNCipedia transcript ID: lnc-GABPA-20:1 
LNCipedia gene ID: lnc-GABPA-20
Location (hg19): chr21:28342604-28431801
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1754 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT081555
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 21.0244 non-coding 
CPAT coding probability 21.80% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GABPA-20:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GABPA-20:1
4.0 lnc-GABPA-20:1
4.1 lnc-GABPA-20:1
5.0 lnc-GABPA-20:1
5.1 lnc-OLIG1-54:1
5.2 lnc-GABPA-20:1