Transcript: lnc-GABPA-20:3

Basic information

LNCipedia transcript ID: lnc-GABPA-20:3 
LNCipedia gene ID: lnc-GABPA-20
Location (hg19): chr21:28384504-28396980
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 449 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT081557
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -25.9496 non-coding 
CPAT coding probability 0.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GABPA-20:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GABPA-20:3
4.0 lnc-GABPA-20:3
4.1 lnc-GABPA-20:3
5.0 lnc-GABPA-20:3
5.1 lnc-OLIG1-54:3
5.2 lnc-GABPA-20:3