Transcript: lnc-GABPA-3:9

Basic information

LNCipedia transcript ID: lnc-GABPA-3:9 
LNCipedia gene ID: lnc-GABPA-3
Location (hg19): chr21:27794752-27799050
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3934 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000232692.1|ENCT00000270616.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -13.8237 non-coding 
CPAT coding probability 1.97% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GABPA-3:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-GABPA-3:9
5.0 lnc-GABPA-3:9
5.1 lnc-OLIG1-60:8
5.2 lnc-GABPA-3:9