Transcript: lnc-GABPB1-3:1

Basic information

LNCipedia transcript ID: lnc-GABPB1-3:1 
LNCipedia gene ID: lnc-GABPB1-3
Location (hg19): chr15:50716114-50716506
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 393 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000024906.1|ENCT00000148836.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -710.973 non-coding 
CPAT coding probability 2.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GABPB1-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-GABPB1-3:1
5.0 lnc-GABPB1-3:1
5.1 lnc-DNAAF4-98:1
5.2 lnc-GABPB1-3:1