Transcript: lnc-GADD45A-2:2

Basic information

LNCipedia transcript ID: lnc-GADD45A-2:2 
LNCipedia gene ID: lnc-GADD45A-2
Location (hg19): chr1:68851157-68857667
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 6511 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000233589.1|ENCT00000007045.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 34.498 non-coding 
CPAT coding probability 44.49% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-GADD45A-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-GADD45A-2:2
5.0 lnc-GADD45A-2:2
5.1 lnc-CTH-22:1
5.2 lnc-GADD45A-2:2