Transcript: lnc-GALK1-3:1

Basic information

LNCipedia transcript ID: lnc-GALK1-3:1 
LNCipedia gene ID: lnc-GALK1-3
Location (hg19): chr17:73721916-73732378
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1286 bp
Exons: 5
Sources: Nielsen et al.,2014
Alternative transcript names: refGeneNc_1176_NR_002219
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 71.287 coding 
CPAT coding probability 7.99% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-GALK1-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GALK1-3:1
4.0 lnc-GALK1-3:1
4.1 lnc-GALK1-3:1
5.0 lnc-GALK1-3:1
5.1 lnc-CASKIN2-10:1
5.2 lnc-GALK1-3:1