Transcript: lnc-GALNT10-2:1

Basic information

LNCipedia transcript ID: lnc-GALNT10-2:1 
LNCipedia gene ID: lnc-GALNT10-2
Location (hg19): chr5:153456773-153494988
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 438 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: l_3041_chr5:153456772-153494671_brain
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -312.9449 non-coding 
CPAT coding probability 11.90% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GALNT10-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GALNT10-2:1
4.0 lnc-GALNT10-2:1
4.1 lnc-GALNT10-2:1
5.0 lnc-GALNT10-2:1
5.1 lnc-SAP30L-7:1
5.2 lnc-GALNT10-2:1