Transcript: lnc-GALNT15-6:2

Basic information

LNCipedia transcript ID: lnc-GALNT15-6:2 
LNCipedia gene ID: lnc-GALNT15-6
Location (hg19): chr3:16380850-16381378
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 529 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000272498.1|ENST00000607363.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -109.2806 non-coding 
CPAT coding probability 3.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GALNT15-6:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-OXNAD1-4:2
5.0 lnc-OXNAD1-4:2
5.1 lnc-MKRN2-54:2
5.2 lnc-GALNT15-6:2