Transcript: lnc-GALNT15-8:7

Basic information

LNCipedia transcript ID: lnc-GALNT15-8:7 
LNCipedia gene ID: lnc-GALNT15-8
Location (hg19): chr3:16006336-16179403
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 864 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000059277.1|FTMT21100060911.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -106.4584 non-coding 
CPAT coding probability 2.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GALNT15-8:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-GALNTL2-5:8
5.0 lnc-GALNTL2-5:8
5.1 lnc-MKRN2-45:7
5.2 lnc-GALNT15-8:7