Transcript: lnc-GALNT16-1:1

Basic information

LNCipedia transcript ID: lnc-GALNT16-1:1 
LNCipedia gene ID: lnc-GALNT16-1
Location (hg19): chr14:69823727-69826025
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2299 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT037522
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -47.3547 non-coding 
CPAT coding probability 25.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GALNT16-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GALNTL1-1:1
4.0 lnc-GALNTL1-1:1
4.1 lnc-GALNTL1-1:1
5.0 lnc-GALNTL1-1:1
5.1 lnc-ACOT2-64:1
5.2 lnc-GALNT16-1:1