Transcript: lnc-GALNTL5-2:8

Basic information

LNCipedia transcript ID: lnc-GALNTL5-2:8 
LNCipedia gene ID: lnc-GALNTL5-2
Ensembl Gene ID: ENSG00000242048
Ensembl Transcript ID: ENST00000481153
Location (hg19): chr7:151503702-151504728
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 621 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000481153.3
Alternative gene names: ENSG00000242048.3; RP13-452N2.1; AC093583.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -93.2889 non-coding 
CPAT coding probability 2.92% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GALNTL5-2:8 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-GALNTL5-2:8
4.1 lnc-GALNTL5-2:8
5.0 lnc-GALNTL5-2:8
5.1 lnc-GIMAP2-35:7
5.2 lnc-GALNTL5-2:8