Transcript: lnc-GAMT-9:1

Basic information

LNCipedia transcript ID: lnc-GAMT-9:1 
LNCipedia gene ID: lnc-GAMT-9
Location (hg19): chr19:1352205-1354811
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2607 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000039994.1|ENCT00000209709.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 43.4679 non-coding 
CPAT coding probability 0.56% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-GAMT-9:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-GAMT-9:1
5.0 lnc-GAMT-9:1
5.1 lnc-ZNF77-108:1
5.2 lnc-GAMT-9:1