Transcript: lnc-GAPT-6:3

Basic information

LNCipedia transcript ID: lnc-GAPT-6:3 
LNCipedia gene ID: lnc-GAPT-6
Location (hg19): chr5:57787319-57790343
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 540 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT101611
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -240.4383 non-coding 
CPAT coding probability 5.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GAPT-6:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RAB3C-6:2
4.0 lnc-GAPT-6:3
4.1 lnc-GAPT-6:3
5.0 lnc-GAPT-6:3
5.1 lnc-GAPT-6:3
5.2 lnc-GAPT-6:3