Transcript: lnc-GAST-2:1

Basic information

LNCipedia transcript ID: lnc-GAST-2:1 
LNCipedia gene ID: lnc-GAST-2
Location (hg19): chr17:39847468-39847896
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 429 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT053648
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -45.0303 non-coding 
CPAT coding probability 0.01% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GAST-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-EIF1-2:5
4.0 lnc-EIF1-2:5
4.1 lnc-EIF1-2:5
5.0 lnc-EIF1-2:5
5.1 lnc-ATP6V0A1-24:5
5.2 lnc-GAST-2:1