Transcript: lnc-GATA3-20:2

Basic information

LNCipedia transcript ID: lnc-GATA3-20:2 
LNCipedia gene ID: lnc-GATA3-20
Location (hg19): chr10:9071009-9081590
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 630 bp
Exons: 3
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1523:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -113.2413 non-coding 
CPAT coding probability 1.93% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GATA3-20:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-GATA3-20:2
4.1 lnc-GATA3-20:2
5.0 lnc-GATA3-20:2
5.1 lnc-NPY4R2-412:1
5.2 lnc-GATA3-20:2