Transcript: lnc-GCH1-2:4

Basic information

LNCipedia transcript ID: lnc-GCH1-2:4 
LNCipedia gene ID: lnc-GCH1-2
Location (hg19): chr14:55151441-55195997
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1627 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000021168.1|FTMT25300000198.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -123.949 non-coding 
CPAT coding probability 2.73% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GCH1-2:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-GCH1-2:4
5.0 lnc-GCH1-2:4
5.1 lnc-RTN1-57:1
5.2 lnc-GCH1-2:4