Transcript: lnc-GCLC-1:11

Basic information

LNCipedia transcript ID: lnc-GCLC-1:11 
LNCipedia gene ID: lnc-GCLC-1
RefSeq ID: NR_110840
Location (hg19): chr6:53426087-53438073
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 3531 bp
Exons: 4
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_110840; NR_110840.1
Alternative gene names: LOC101927136


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 3.7552 non-coding 
CPAT coding probability 1.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GCLC-1:11 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KLHL31-1:12
4.0 lnc-GCLC-1:11
4.1 lnc-GCLC-1:11
5.0 lnc-GCLC-1:11
5.1 lnc-GSTA5-13:10
5.2 lnc-GCLC-1:11