Transcript: lnc-GCLC-1:3

Basic information

LNCipedia transcript ID: lnc-GCLC-1:3 
LNCipedia gene ID: lnc-GCLC-1
Location (hg19): chr6:53426087-53481967
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 3682 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00011219; NONHSAT113183
Alternative gene names: XLOC_005747; linc-GCLC


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 3.7552 non-coding 
CPAT coding probability 1.01% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GCLC-1:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-KLHL31-1:1
3.1 lnc-KLHL31-1:2
4.0 lnc-GCLC-1:3
4.1 lnc-GCLC-1:3
5.0 lnc-GCLC-1:3
5.1 lnc-GSTA5-13:2
5.2 lnc-GCLC-1:3