Transcript: lnc-GCNT3-1:6

Basic information

LNCipedia transcript ID: lnc-GCNT3-1:6 
LNCipedia gene ID: lnc-GCNT3-1
Location (hg19): chr15:59981765-59982878
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1114 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000259238.1|ENCT00000142442.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 6.4253 non-coding 
CPAT coding probability 0.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GCNT3-1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-GCNT3-1:6
5.0 lnc-GCNT3-1:6
5.1 lnc-MAP2K1-88:6
5.2 lnc-GCNT3-1:6