Transcript: lnc-GDF10-2:3

Basic information

LNCipedia transcript ID: lnc-GDF10-2:3 
LNCipedia gene ID: lnc-GDF10-2
Location (hg19): chr10:48510125-48532615
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 5084 bp
Exons: 5
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00018501; NONHSAT013223
Alternative gene names: XLOC_008811; linc-GDF10-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -22.8434 non-coding 
CPAT coding probability 1.95% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GDF10-2:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GDF10-2:3
3.1 lnc-GDF10-2:3
4.0 lnc-GDF10-2:3
4.1 lnc-GDF10-2:3
5.0 lnc-GDF10-2:3
5.1 lnc-NPY4R2-15:3
5.2 lnc-GDF10-2:3