Transcript: lnc-GDF11-1:3

Basic information

LNCipedia transcript ID: lnc-GDF11-1:3 
LNCipedia gene ID: lnc-GDF11-1
Location (hg19): chr12:56122876-56124862
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1681 bp
Exons: 2
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA297:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 5.2347 non-coding 
CPAT coding probability 3.97% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GDF11-1:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-RDH5-1:4
4.1 lnc-GDF11-1:3
5.0 lnc-GDF11-1:3
5.1 lnc-BLOC1S1-1:2
5.2 lnc-GDF11-1:3