Transcript: lnc-GFAP-3:3

Basic information

LNCipedia transcript ID: lnc-GFAP-3:3 
LNCipedia gene ID: lnc-GFAP-3
Location (hg19): chr17:42964031-42969697
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 584 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT053984
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -47.8894 non-coding 
CPAT coding probability 0.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GFAP-3:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GFAP-3:3
4.0 lnc-GFAP-3:3
4.1 lnc-GFAP-3:3
5.0 lnc-GFAP-3:3
5.1 lnc-GFAP-3:3
5.2 lnc-GFAP-3:3