Transcript: lnc-GGCT-1:44

Basic information

LNCipedia transcript ID: lnc-GGCT-1:44 
LNCipedia gene ID: lnc-GGCT-1
Location (hg19): chr7:30564000-30601739
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 985 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT119881
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -24.0855 non-coding 
CPAT coding probability 1.77% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GGCT-1:44 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GGCT-1:44
4.0 lnc-GGCT-1:44
4.1 lnc-GGCT-1:44
5.0 lnc-GGCT-1:44
5.1 lnc-PDE1C-13:72
5.2 lnc-GGCT-1:44