Transcript: lnc-GGCT-1:75

Basic information

LNCipedia transcript ID: lnc-GGCT-1:75 
LNCipedia gene ID: lnc-GGCT-1
Location (hg19): chr7:30617684-30634379
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 434 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000196295.7|ENST00000583664.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 12.2854 non-coding 
CPAT coding probability 0.52% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GGCT-1:75 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-GGCT-1:75
5.0 lnc-GGCT-1:75
5.1 lnc-PDE1C-13:21
5.2 lnc-GGCT-1:75