Transcript: lnc-GGT2-2:13

Basic information

LNCipedia transcript ID: lnc-GGT2-2:13 
LNCipedia gene ID: lnc-GGT2-2
Location (hg19): chr22:21495618-21496738
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1121 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1737:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 28.5173 non-coding 
CPAT coding probability 47.91% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-GGT2-2:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-POM121L7-2:1
4.1 lnc-POM121L7-2:1
5.0 lnc-POM121L7-2:1
5.1 lnc-SCARF2-23:1
5.2 lnc-GGT2-2:13