Transcript: lnc-GIMD1-5:2

Basic information

LNCipedia transcript ID: lnc-GIMD1-5:2 
LNCipedia gene ID: lnc-GIMD1-5
Location (hg19): chr4:107037476-107134928
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 592 bp
Exons: 6
Sources: NONCODE v4
Alternative transcript names: NONHSAT097703
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -229.7101 non-coding 
CPAT coding probability 56.44% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-GIMD1-5:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-INTS12-5:2
4.0 lnc-INTS12-5:2
4.1 lnc-INTS12-5:2
5.0 lnc-INTS12-5:2
5.1 lnc-SLC9B2-42:2
5.2 lnc-GIMD1-5:2