Transcript: lnc-GINS1-2:7

Basic information

LNCipedia transcript ID: lnc-GINS1-2:7 
LNCipedia gene ID: lnc-GINS1-2
RefSeq ID: NR_135006
Location (hg19): chr20:25731844-25736686
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3619 bp
Exons: 2
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_135006.1
Alternative gene names: LOC105372582


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 10.4764 non-coding 
CPAT coding probability 0.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GINS1-2:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-CST8-45:6
5.1 lnc-CST8-45:6
5.2 lnc-GINS1-2:7