Transcript: lnc-GJA10-7:1

Basic information

LNCipedia transcript ID: lnc-GJA10-7:1 
LNCipedia gene ID: lnc-GJA10-7
Location (hg19): chr6:93098931-93105082
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 329 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00011889; NONHSAT114006
Alternative gene names: XLOC_005388; linc-MANEA-6


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -183.889 non-coding 
CPAT coding probability 0.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GJA10-7:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GJA10-5:1
3.1 lnc-GJA10-7:1
4.0 lnc-GJA10-7:1
4.1 lnc-GJA10-7:1
5.0 lnc-GJA10-7:1
5.1 lnc-PM20D2-32:1
5.2 lnc-GJA10-7:1