Transcript: lnc-GKAP1-1:1

Basic information

LNCipedia transcript ID: lnc-GKAP1-1:1 
LNCipedia gene ID: lnc-GKAP1-1
Location (hg19): chr9:86274886-86300968
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 6055 bp
Exons: 9
Sources: NONCODE v4
Alternative transcript names: NONHSAT132742
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 2650.292 coding 
CPAT coding probability 98.87% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-GKAP1-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GKAP1-1:1
4.0 lnc-GKAP1-1:1
4.1 lnc-GKAP1-1:1
5.0 lnc-GKAP1-1:1
5.1 lnc-SEMA4D-90:1
5.2 lnc-GKAP1-1:1