Transcript: lnc-GLA-1:1

Basic information

LNCipedia transcript ID: lnc-GLA-1:1 
LNCipedia gene ID: lnc-GLA-1
Location (hg19): chrX:100759568-100764657
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1082 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00017353; NONHSAT137934
Alternative gene names: XLOC_008198; linc-GLA-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -13.9219 non-coding 
CPAT coding probability 1.80% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GLA-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GLA-1:1
3.1 lnc-GLA-1:1
4.0 lnc-GLA-1:1
4.1 lnc-GLA-1:1
5.0 lnc-GLA-1:1
5.1 lnc-RAB40A-37:1
5.2 lnc-GLA-1:1